CDS

Accession Number TCMCG016C19022
gbkey CDS
Protein Id OMO67959.1
Location join(18610..18960,19742..21155,21686..21789,21880..21930)
Organism Corchorus capsularis
locus_tag CCACVL1_20176

Protein

Length 639aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01012321.1
Definition Zinc finger, RING-type [Corchorus capsularis]
Locus_tag CCACVL1_20176

EGGNOG-MAPPER Annotation

COG_category O
Description PHD-finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
KEGG_ko ko:K17586        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGGTGACTCAAGAACCAACTCGCCATCTTCTTCGCCGAACAAGCGCCTCAAACTCACAAGCCCCGACTCCAAATCAATCATCCAGGTGGAGGAACAAGCATCAGCTTACGAAGATGATTCAGATTCCGATATATGCGGAATATGCTTATCGGACGGTGGAAGAGGAGCCATCAGAGGCAAAATCGACAGCTGCGATCACTATTTCTGCTTCGTTTGTATCATGGAATGGGCCAAGGTGGAGTCGCGCTGCCCTATGTGCAAGCGCAGGTTCACCGCCATTTGTAGGCCGCCGAAGGAAGGTGTCTTTGCCACCGAACGCCTCGTTAACGTCCCTCAACGAGATCAGGTTTACCATCTGTATGGAAATGCAACATCTGGTCCTTTTAATCCTTATTCAGAATCTAAATGCAGTGTGTGCCATGGTATATCTGACGAAAGTCTTTTACTACTTTGTGATCTCTGTGATTCGGCTGCTCATACTTACTGTGTTGGCTTGGGTGCGACTGTGCCTGATGGTGACTGGTTTTGTCATGACTGTGCTCTTTCTCGGTCTGAACACAACAAAAATGAAGTAGACACTGACACTGATGATAACGTAATACCTGGAAGTACTAATATCAAATTACTTGTAGAGGCAAATGCTTCAATTTTTGATATAGTACAAGAGTCAAATATTCCAGTACTTGGTGGACATAATGCAAGTCTGCTACCTCCACTCATCCCTCAAAGGGAATGCATTGCTGCGGATGAAGTAAGTGGTCCAACTGAAAGAAATAGGAATAATGCGTGCAATTCTACCCAATCTGGTGCTACCCAATCTGGTGCAAGAACATTGGGACGTTGTCGAAATGTGCACAACCGCATACGAGCTCTTCGTGAAAATTGGCGTGCGTTGCAGAGTAGATCATTAAGTTTCTCTCCTAGCTTGGGTGAACCTGGTGGTAGTAGTTCTAGGAAAGGTAAGACTGCACACACTTCATTATTAGATAATAGTTCCAGTGGACCACAATCATCCTCTTCTACAAGTCAACCATCAACTTCGCAAGATGGTTTTGTTGAGCCTAAGGGAGATCTGTATGATACAGAGAAGGCATGGAAAATGATGAATATTGCCAAGTCAATGCAAAACAAGCATAAAAAGACTAGTAGTCTTAAACAGTCCTCAACAAAACCTTCTTGCCTGGGGAGTGCATCAAAAAAAGCAATAAGCAATTCAGGTCTTGATATATCAAAAATCCAGCAAAGTGAAAGTAGGAATGAGGACAGCATGGGAAAACAGAGGCAGCACAGGTATTATCATCGTGAAAGGGAAAAGGGAAAGCATAAATATCCAGAGATGGAAAAGCAAAAGGGAACGGTTATGAATGTAGAATCCAGTGAGAGAGTTCTTGCTCCTCTTTCCCCTAAATCTTTCCAATCTCCATCATCTACTAAGTTCTATATACAAAATGATGACTGCCATGTAAATGGTGTGAGACCATTTGTGAATAATGATCAAAGAAAATGTCAAGGATCATCTTCTCATGCAAGCAAGGATGGTTATTCTTGTTCAAGTATTGTTGGTTCAGTGTTACAAGGATCTACTGGTTCATCACATTCGAAGTCAGAGGTTGGTGTATCTAAATTAGATGTACCTGAGGGGAGAACAAGGATGGGGAAGAGTTCCAAAAGCAAGGATGGACAAGATGATAATGTCAAAAGTGAGATCCAATCTCTTGTTAAACTCAATTTAAGGCTTCTAAGCCAAGACAAGCGATTAGGAGTTGATGCATTTAAGGAGATTGCTAGGCTTGCCACCCATACCATCTTGGCAGCATGTGGCTTTGAGCACTCTAAATCCAGTATCCATTTTTTTCCTAGCTCAAATGTTGTTAGCTCTGTTATGATTGAGAAAGCTTACCGTGGAGCTTACTGA
Protein:  
MAGDSRTNSPSSSPNKRLKLTSPDSKSIIQVEEQASAYEDDSDSDICGICLSDGGRGAIRGKIDSCDHYFCFVCIMEWAKVESRCPMCKRRFTAICRPPKEGVFATERLVNVPQRDQVYHLYGNATSGPFNPYSESKCSVCHGISDESLLLLCDLCDSAAHTYCVGLGATVPDGDWFCHDCALSRSEHNKNEVDTDTDDNVIPGSTNIKLLVEANASIFDIVQESNIPVLGGHNASLLPPLIPQRECIAADEVSGPTERNRNNACNSTQSGATQSGARTLGRCRNVHNRIRALRENWRALQSRSLSFSPSLGEPGGSSSRKGKTAHTSLLDNSSSGPQSSSSTSQPSTSQDGFVEPKGDLYDTEKAWKMMNIAKSMQNKHKKTSSLKQSSTKPSCLGSASKKAISNSGLDISKIQQSESRNEDSMGKQRQHRYYHREREKGKHKYPEMEKQKGTVMNVESSERVLAPLSPKSFQSPSSTKFYIQNDDCHVNGVRPFVNNDQRKCQGSSSHASKDGYSCSSIVGSVLQGSTGSSHSKSEVGVSKLDVPEGRTRMGKSSKSKDGQDDNVKSEIQSLVKLNLRLLSQDKRLGVDAFKEIARLATHTILAACGFEHSKSSIHFFPSSNVVSSVMIEKAYRGAY